STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tango6Transport and golgi organization 6. (1079 aa)    
Predicted Functional Partners:
Heatr4
HEAT repeat containing 4.
      
 0.544
Tmco2
Transmembrane and coiled-coil domains 2.
      
 0.517
Pramef20
PRAME family member 20.
      
 0.517
ENSMSIP00000006164
annotation not available
    
 
 0.495
Urb1
URB1 ribosome biogenesis 1 homolog (S. cerevisiae).
   
    0.475
Msl1
Male specific lethal 1.
      
 0.404
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.