Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ScaperS phase cyclin A-associated protein in the ER. (1356 aa)    
Predicted Functional Partners:
Ccna2
Cyclin A2.
    
 
 0.951
Ccna1
Cyclin A1.
    
 
 0.878
Ttc5
Tetratricopeptide repeat domain 5.
    
 
 0.750
ENSMSIP00000032149
annotation not available
    
 
 0.750
Iars2
isoleucine-tRNA synthetase 2, mitochondrial.
      
 0.633
Bbs7
Bardet-Biedl syndrome 7 (human).
      
 0.630
Rcn2
Reticulocalbin 2.
      
 0.596
Trim44
Tripartite motif-containing 44.
      
 0.579
Poc5
POC5 centriolar protein.
      
 0.577
Opa1
OPA1, mitochondrial dynamin like GTPase.
      
 0.572
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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