STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdh3Cadherin 3. (822 aa)    
Predicted Functional Partners:
Jup
Junction plakoglobin.
   
 0.994
Ctnnb1
Catenin (cadherin associated protein), beta 1.
   
 0.993
ENSMSIP00000003572
annotation not available
    
 0.991
Arvcf
Armadillo repeat gene deleted in velocardiofacial syndrome.
    
 0.969
ENSMSIP00000035122
annotation not available
    
 0.951
Cdh2
Cadherin 2.
    
0.937
Cdh7
Cadherin 7, type 2.
    
0.915
Cdh20
Cadherin 20.
     
0.907
Cdh5
Cadherin 5.
     
0.905
Cdh1
Cadherin 1.
  
0.901
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.