Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Abca17ATP-binding cassette, sub-family A (ABC1), member 17. (1665 aa)    
Predicted Functional Partners:
Abca4
ATP-binding cassette, sub-family A (ABC1), member 4.
    
 0.911
Abca3
ATP-binding cassette, sub-family A (ABC1), member 3.
     
  0.839
Trip12
Thyroid hormone receptor interactor 12.
     
 0.834
Abca15
ATP-binding cassette, sub-family A (ABC1), member 15.
     
  0.695
Abca16
ATP-binding cassette, sub-family A (ABC1), member 16.
     
  0.695
Cox15
Cytochrome c oxidase assembly protein 15.
    
 0.572
Nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.534
Gbe1
Glucan (1,4-alpha-), branching enzyme 1.
   
 
  0.524
Abca1
ATP-binding cassette, sub-family A (ABC1), member 1.
    
 0.509
Abca2
ATP-binding cassette, sub-family A (ABC1), member 2.
    
 0.509
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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