STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Efcab2EF-hand calcium binding domain 2. (187 aa)    
Predicted Functional Partners:
ENSMSIP00000037621
annotation not available
    
 0.901
ENSMSIP00000037640
annotation not available
    
 0.901
Wdr90
WD repeat domain 90.
    
 
 0.799
Myo9b
Myosin IXb.
    
 0.771
Myo3b
Myosin IIIB.
   
 0.728
ENSMSIP00000037903
annotation not available
   
 0.728
Ppef2
Protein phosphatase, EF hand calcium-binding domain 2.
    
 0.688
Pskh1
Protein serine kinase H1.
   
 0.666
Ranbp2
RAN binding protein 2.
    
 0.658
Tax1bp1
Tax1 (human T cell leukemia virus type I) binding protein 1.
    
 0.613
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.