STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lrrc7Leucine rich repeat containing 7. (1595 aa)    
Predicted Functional Partners:
Camk2a
Calcium/calmodulin-dependent protein kinase II alpha.
    
 0.961
Ctnnd2
Catenin (cadherin associated protein), delta 2.
    
 0.909
Syngap1
Synaptic Ras GTPase activating protein 1 homolog (rat).
   
 
 0.907
Camk2b
Calcium/calmodulin-dependent protein kinase II, beta.
    
 0.859
Nod1
Nucleotide-binding oligomerization domain containing 1.
    
 0.858
Nod2
Nucleotide-binding oligomerization domain containing 2.
    
 0.858
Camk2d
Calcium/calmodulin-dependent protein kinase II, delta.
    
 0.858
Erbb3
Erb-b2 receptor tyrosine kinase 3.
   
 0.842
Erbb4
Erb-b2 receptor tyrosine kinase 4.
   
 0.842
Egfr
Epidermal growth factor receptor.
    
 0.841
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.