Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ptpn5Protein tyrosine phosphatase, non-receptor type 5. (541 aa)    
Predicted Functional Partners:
Mapk3
Mitogen-activated protein kinase 3.
    
 0.963
Mapk1
Mitogen-activated protein kinase 1.
    
 0.963
Mapk7
Mitogen-activated protein kinase 7.
    
 0.932
Grin2b
Glutamate receptor, ionotropic, NMDA2B (epsilon 2).
   
 
 0.919
Ptprr
Protein tyrosine phosphatase, receptor type, R.
     
 0.911
Ptpn7
Protein tyrosine phosphatase, non-receptor type 7.
     
 0.911
Fyn
Fyn proto-oncogene.
    
 0.909
ENSMSIP00000033969
annotation not available
    
 0.907
Mapk14
Mitogen-activated protein kinase 14.
    
 0.899
Mapk13
Mitogen-activated protein kinase 13.
    
 0.899
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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