Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Thy1Thymus cell antigen 1, theta. (162 aa)    
Predicted Functional Partners:
ENSMSIP00000029229
annotation not available
    
 0.955
Itgb1
Integrin beta 1 (fibronectin receptor beta).
     
 0.942
Itgax
Integrin alpha X.
    
 0.925
Itgad
Integrin, alpha D.
    
 0.910
Itgb2
Integrin beta 2.
     
 0.901
Itgb2l
Integrin beta 2-like.
     
 0.897
Cd4
CD4 antigen.
      
 0.881
Itgb7
Integrin beta 7.
   
 
 0.874
Itgae
Integrin alpha E, epithelial-associated.
    
 0.863
Pigk
Phosphatidylinositol glycan anchor biosynthesis, class K.
    
 
 0.856
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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