STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D17H6S53EDNA segment, Chr 17, human D6S53E. (293 aa)    
Predicted Functional Partners:
Gpank1
G patch domain and ankyrin repeats 1.
      
 0.586
Fgfr3
Fibroblast growth factor receptor 3.
    
   0.583
Bag6
BCL2-associated athanogene 6.
      
 0.543
Ly6g5c
Lymphocyte antigen 6 complex, locus G5C.
      
 0.523
Tcf19
Transcription factor 19.
      
 0.474
Fam163a
Family with sequence similarity 163, member A.
      
 0.462
Tfap2d
Transcription factor AP-2, delta.
      
 0.462
2310033P09Rik
RIKEN cDNA 2310033P09 gene.
      
 0.444
Sdf4
Stromal cell derived factor 4.
      
 0.443
Abt1
Activator of basal transcription 1.
      
 0.427
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.