ENSMSIP00000006352 protein (Mus spicilegus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSMSIP00000006352

annotation not available (853 aa)

Predicted Functional Partners:

Psmd1

0.999

Psmd3

0.999

Psmd7

0.998

Psmd6

0.998

Psmd13

0.998

Psmd12

0.998

Psmc5

0.998

Psmc3

0.998

Psmc4

0.997

Psmd14

0.997

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMSIP00000006352	Psmc3	ENSMSIP00000006352	ENSMSIP00000032837	annotation not available	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	0.998
ENSMSIP00000006352	Psmc4	ENSMSIP00000006352	ENSMSIP00000003630	annotation not available	Proteasome (prosome, macropain) 26S subunit, ATPase, 4.	0.997
ENSMSIP00000006352	Psmc5	ENSMSIP00000006352	ENSMSIP00000029936	annotation not available	Protease (prosome, macropain) 26S subunit, ATPase 5.	0.998
ENSMSIP00000006352	Psmd1	ENSMSIP00000006352	ENSMSIP00000003149	annotation not available	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 1.	0.999
ENSMSIP00000006352	Psmd12	ENSMSIP00000006352	ENSMSIP00000027535	annotation not available	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 12.	0.998
ENSMSIP00000006352	Psmd13	ENSMSIP00000006352	ENSMSIP00000016929	annotation not available	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 13.	0.998
ENSMSIP00000006352	Psmd14	ENSMSIP00000006352	ENSMSIP00000017085	annotation not available	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 14.	0.997
ENSMSIP00000006352	Psmd3	ENSMSIP00000006352	ENSMSIP00000031758	annotation not available	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 3.	0.999
ENSMSIP00000006352	Psmd6	ENSMSIP00000006352	ENSMSIP00000016621	annotation not available	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 6.	0.998
ENSMSIP00000006352	Psmd7	ENSMSIP00000006352	ENSMSIP00000003456	annotation not available	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 7.	0.998
Psmc3	ENSMSIP00000006352	ENSMSIP00000032837	ENSMSIP00000006352	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	annotation not available	0.998
Psmc3	Psmc4	ENSMSIP00000032837	ENSMSIP00000003630	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	Proteasome (prosome, macropain) 26S subunit, ATPase, 4.	0.999
Psmc3	Psmc5	ENSMSIP00000032837	ENSMSIP00000029936	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	Protease (prosome, macropain) 26S subunit, ATPase 5.	0.999
Psmc3	Psmd1	ENSMSIP00000032837	ENSMSIP00000003149	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 1.	0.999
Psmc3	Psmd12	ENSMSIP00000032837	ENSMSIP00000027535	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 12.	0.999
Psmc3	Psmd13	ENSMSIP00000032837	ENSMSIP00000016929	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 13.	0.999
Psmc3	Psmd14	ENSMSIP00000032837	ENSMSIP00000017085	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 14.	0.999
Psmc3	Psmd3	ENSMSIP00000032837	ENSMSIP00000031758	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 3.	0.999
Psmc3	Psmd6	ENSMSIP00000032837	ENSMSIP00000016621	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 6.	0.999
Psmc3	Psmd7	ENSMSIP00000032837	ENSMSIP00000003456	Proteasome (prosome, macropain) 26S subunit, ATPase 3.	Proteasome (prosome, macropain) 26S subunit, non-ATPase, 7.	0.999