STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubr3Ubiquitin protein ligase E3 component n-recognin 3. (1849 aa)    
Predicted Functional Partners:
Hectd1
HECT domain E3 ubiquitin protein ligase 1.
   
  
 0.884
ENSMSIP00000003529
annotation not available
   
    0.867
Trip12
Thyroid hormone receptor interactor 12.
   
 
 0.826
Ube3c
Ubiquitin protein ligase E3C.
   
  
 0.648
Ubr7
Ubiquitin protein ligase E3 component n-recognin 7 (putative).
      
 0.595
Ubr4
Ubiquitin protein ligase E3 component n-recognin 4.
     
 0.562
Appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
    0.526
Appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
   
    0.526
Ate1
Arginyltransferase 1.
   
  
 0.522
Arhgap4
Rho GTPase activating protein 4.
      
 0.522
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.