Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Actl9Actin-like 9. (415 aa)    
Predicted Functional Partners:
Cfl2
Cofilin 2, muscle.
   
 0.902
Myh9
Myosin, heavy polypeptide 9, non-muscle.
   
 0.894
Smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
    
 0.892
Actg2
Actin, gamma 2, smooth muscle, enteric.
   
  0.891
Actr3
ARP3 actin-related protein 3.
   
 0.890
Actr3b
ARP3 actin-related protein 3B.
   
 0.890
Arpc4
Actin related protein 2/3 complex, subunit 4.
    
 0.887
Actl6a
Actin-like 6A.
    
 0.886
ENSMSIP00000001540
annotation not available
   
 0.876
Mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.874
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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