Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fam219aFamily with sequence similarity 219, member A. (174 aa)    
Predicted Functional Partners:
Gpr37
G protein-coupled receptor 37.
    
   0.933
Gatad2a
GATA zinc finger domain containing 2A.
    
   0.852
Mta3
Metastasis associated 3.
    
   0.830
Mre11a
MRE11A homolog A, double strand break repair nuclease.
    
 
 0.821
Gpr37l1
G protein-coupled receptor 37-like 1.
    
   0.813
Gatad2b
GATA zinc finger domain containing 2B.
    
   0.756
Mbd3
methyl-CpG binding domain protein 3.
    
   0.584
ENSMSIP00000013854
annotation not available
    
   0.584
Mbd3l1
methyl-CpG binding domain protein 3-like 1.
    
   0.584
Mta1
Metastasis associated 1.
    
   0.584
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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