STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mn1Meningioma 1. (1296 aa)    
Predicted Functional Partners:
Dolk
Dolichol kinase.
    
 0.635
Cnep1r1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
     
 0.585
ENSMSIP00000001112
annotation not available
    
 0.551
Soat1
Sterol O-acyltransferase 1.
    
 0.551
Mboat2
Membrane bound O-acyltransferase domain containing 2.
     
 0.535
St13
Suppression of tumorigenicity 13.
      
 0.527
Mtbp
Mdm2, transformed 3T3 cell double minute p53 binding protein.
    
 
 0.495
Ublcp1
Ubiquitin-like domain containing CTD phosphatase 1.
    
 0.493
Timm50
Translocase of inner mitochondrial membrane 50.
    
 0.486
Ctdp1
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1.
    
 0.486
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.