STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dnase1l2Deoxyribonuclease 1-like 2. (278 aa)    
Predicted Functional Partners:
Sin3a
Transcriptional regulator, SIN3A (yeast).
    
 0.835
Sin3b
Transcriptional regulator, SIN3B (yeast).
    
 0.835
ENSMSIP00000012646
annotation not available
   
    0.808
Phf13
PHD finger protein 13.
    
  0.757
Tnf
Tumor necrosis factor.
    
 
 0.752
Slc25a21
Solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21.
    
   0.750
Tbx20
T-box 20.
    
   0.685
Rims2
Regulating synaptic membrane exocytosis 2.
     
 0.636
Ppy
Pancreatic polypeptide.
   
   0.628
Ikbkg
Inhibitor of kappaB kinase gamma.
   
 0.623
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.