Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Txnl1Thioredoxin-like 1. (289 aa)    
Predicted Functional Partners:
Psmd14
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 14.
   
 
 0.982
Psmd7
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 7.
   
 
 0.966
Psmc3
Proteasome (prosome, macropain) 26S subunit, ATPase 3.
   
   0.956
Psmd12
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 12.
   
   0.947
Psmb2
Proteasome (prosome, macropain) subunit, beta type 2.
   
   0.943
Rad23b
RAD23 homolog B, nucleotide excision repair protein.
   
   0.940
ENSMSIP00000004100
annotation not available
   
   0.939
Psmd8
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 8.
   
   0.925
Psmc2
Proteasome (prosome, macropain) 26S subunit, ATPase 2.
   
   0.925
Psmd1
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 1.
   
   0.922
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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