Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000006601annotation not available (1399 aa)    
Predicted Functional Partners:
Preb
Prolactin regulatory element binding.
    
 0.991
Spz1
Spermatogenic leucine zipper 1.
    
 0.907
ENSMSIP00000020022
annotation not available
    
 0.907
Chmp2a
Charged multivesicular body protein 2A.
    
   0.804
Sec24d
Sec24 related gene family, member D (S. cerevisiae).
    
 0.767
Copb2
Coatomer protein complex, subunit beta 2 (beta prime).
   
 
 0.716
Srprb
Signal recognition particle receptor, B subunit.
    
   0.689
Sec23a
SEC23 homolog A, COPII coat complex component.
    
 0.684
ENSMSIP00000009158
annotation not available
    
 0.684
ENSMSIP00000000528
annotation not available
    
 0.654
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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