STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pskh1Protein serine kinase H1. (424 aa)    
Predicted Functional Partners:
Tmem129
Transmembrane protein 129.
   
    0.823
Efcab2
EF-hand calcium binding domain 2.
   
 0.666
Ppef2
Protein phosphatase, EF hand calcium-binding domain 2.
    
 0.608
ENSMSIP00000000381
annotation not available
   
 0.576
ENSMSIP00000000947
annotation not available
   
 0.576
ENSMSIP00000002915
annotation not available
   
 0.576
Calm2
Calmodulin 2.
   
 0.576
Calm1
Calmodulin 1.
   
 0.576
Calm3
Calmodulin 3.
   
 0.576
ENSMSIP00000022571
annotation not available
   
 0.576
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.