Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cc2d2bCoiled-coil and C2 domain containing 2B. (1332 aa)    
Predicted Functional Partners:
Tctn1
Tectonic family member 1.
    
 0.972
B9d1
B9 protein domain 1.
    
 0.965
B9d2
B9 protein domain 2.
    
 0.965
Mks1
Meckel syndrome, type 1.
    
 0.957
Tmem231
Transmembrane protein 231.
    
 
 0.899
Ahi1
Abelson helper integration site 1.
    
 0.883
Tctn2
Tectonic family member 2.
    
 0.877
Tmem67
Transmembrane protein 67.
   
 
 0.871
Tctn3
Tectonic family member 3.
    
 0.849
ENSMSIP00000036610
annotation not available
     
 0.849
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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