Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Crybb1Crystallin, beta B1. (250 aa)    
Predicted Functional Partners:
Cryba4
Crystallin, beta A4.
   
   0.984
Cryba1
Crystallin, beta A1.
   
   0.951
Crybb3
Crystallin, beta B3.
   
   0.909
Bfsp1
Beaded filament structural protein 1, in lens-CP94.
      
 0.868
ENSMSIP00000015013
annotation not available
    
 0.782
Itsn2
Intersectin 2.
    
 0.754
Crybb2
Crystallin, beta B2.
   
   0.735
Cryaa
Crystallin, alpha A.
   
  
 0.696
Bfsp2
Beaded filament structural protein 2, phakinin.
    
 0.681
Tsc2
TSC complex subunit 2.
    
 0.625
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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