STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asphd2Aspartate beta-hydroxylase domain containing 2. (343 aa)    
Predicted Functional Partners:
ENSMSIP00000007024
annotation not available
      
 0.651
Rbm33
RNA binding motif protein 33.
      
 0.604
Sez6l
Seizure related 6 homolog like.
 
 
  
 0.600
Atxn2l
Ataxin 2-like.
      
 0.581
Gm6588
Predicted gene 6588.
      
 0.569
Zbtb40
Zinc finger and BTB domain containing 40.
      
 0.545
Gm6583
Predicted gene 6583.
      
 0.545
ENSMSIP00000006887
annotation not available
      
 0.541
Myo18b
Myosin XVIIIb.
   
  
 0.538
Asb3
Ankyrin repeat and SOCS box-containing 3.
      
 0.535
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.