Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Bloc1s3Biogenesis of lysosomal organelles complex-1, subunit 3. (195 aa)    
Predicted Functional Partners:
ENSMSIP00000007323
annotation not available
    
 0.999
Bloc1s6
Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.
    
 0.999
ENSMSIP00000018173
annotation not available
    
 0.994
ENSMSIP00000038272
annotation not available
    
 0.994
Bloc1s5
Biogenesis of lysosomal organelles complex-1, subunit 5, muted.
    
 0.990
Bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
    
 0.990
Bloc1s4
Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino.
    
 0.974
Snapin
SNAP-associated protein.
    
 0.972
ENSMSIP00000016059
annotation not available
    
 0.972
Txndc5
Thioredoxin domain containing 5.
     
  0.863
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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