Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Atp8b1ATPase, class I, type 8B, member 1. (1251 aa)    
Predicted Functional Partners:
Tmem30a
Transmembrane protein 30A.
    
 0.939
Tmem30b
Transmembrane protein 30B.
   
 0.931
Tmem30c
Transmembrane protein 30C.
    
 0.851
Atp8a2
ATPase, aminophospholipid transporter-like, class I, type 8A, member 2.
  
 
0.729
Atp8a1
ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1.
  
 
0.728
Nme8
NME/NM23 family member 8.
    
 0.684
Atp11b
ATPase, class VI, type 11B.
  
 
0.660
Bspry
B-box and SPRY domain containing.
   
    0.656
Atp11a
ATPase, class VI, type 11A.
  
 
0.655
Abcb11
ATP-binding cassette, sub-family B (MDR/TAP), member 11.
    
 
 0.607
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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