STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atp8b1ATPase, class I, type 8B, member 1. (1251 aa)    
Predicted Functional Partners:
Tmem30a
Transmembrane protein 30A.
   
 0.991
Tmem30b
Transmembrane protein 30B.
   
 0.990
Tmem30c
Transmembrane protein 30C.
   
 0.971
Atp11b
ATPase, class VI, type 11B.
  
  
 
0.896
Atp11a
ATPase, class VI, type 11A.
  
  
 
0.894
Atp8a1
ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1.
  
  
 
0.893
Atp8b4
ATPase, class I, type 8B, member 4.
  
  
 
0.893
Atp8b2
ATPase, class I, type 8B, member 2.
  
  
 
0.893
Atp8a2
ATPase, aminophospholipid transporter-like, class I, type 8A, member 2.
  
  
 
0.868
Atp8b5
ATPase, class I, type 8B, member 5.
  
  
 
0.798
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.