Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Gemin7Gem nuclear organelle associated protein 7. (129 aa)    
Predicted Functional Partners:
Ddx20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20.
    
 0.999
Gemin8
Gem nuclear organelle associated protein 8.
   
 0.999
Gemin4
Gem nuclear organelle associated protein 4.
    
 0.999
Gemin5
Gem nuclear organelle associated protein 5.
    
 0.998
Smn1
Survival motor neuron 1.
    
 0.995
Strap
Serine/threonine kinase receptor associated protein.
    
 0.989
Gemin2
Gem nuclear organelle associated protein 2.
    
 0.971
Snrnp70
Small nuclear ribonucleoprotein 70 (U1).
    
 
 0.954
ENSMSIP00000006975
annotation not available
    
 0.917
ENSMSIP00000017043
annotation not available
    
 0.917
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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