STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Samd8Sterile alpha motif domain containing 8. (523 aa)    
Predicted Functional Partners:
Cerk
Ceramide kinase.
     
 0.918
Gba2
Glucosidase beta 2.
     
 0.915
Enpp7
Ectonucleotide pyrophosphatase/phosphodiesterase 7.
     
 0.914
Smpd4
Sphingomyelin phosphodiesterase 4.
     
 0.914
Ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.913
Asah2
N-acylsphingosine amidohydrolase 2.
     
 0.913
Cers3
Ceramide synthase 3.
     
 0.911
Degs2
Delta(4)-desaturase, sphingolipid 2.
     
 0.907
Smpd2
Sphingomyelin phosphodiesterase 2, neutral.
     
 0.907
Acer2
Alkaline ceramidase 2.
     
 0.903
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.