STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Armcx1Armadillo repeat containing, X-linked 1. (456 aa)    
Predicted Functional Partners:
Rhot1
Ras homolog family member T1.
    
 0.742
Wdr90
WD repeat domain 90.
    
 0.722
Gak
Cyclin G associated kinase.
    
 0.617
Tceal1
Transcription elongation factor A (SII)-like 1.
  
  
 0.563
Snph
Syntaphilin.
      
 0.536
Ubxn7
UBX domain protein 7.
    
 0.529
Gpsm1
G-protein signalling modulator 1 (AGS3-like, C. elegans).
      
 0.522
ENSMSIP00000002928
annotation not available
    
  0.506
ENSMSIP00000035691
annotation not available
    
  0.473
Leo1
Leo1, Paf1/RNA polymerase II complex component.
    
  0.473
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.