Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Pwwp3aPWWP domain containing 3A, DNA repair factor. (718 aa)    
Predicted Functional Partners:
Ndufv1
NADH:ubiquinone oxidoreductase core subunit V1.
  
 0.991
Ndufs8
NADH:ubiquinone oxidoreductase core subunit S8.
  
 0.990
Ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
  
 0.990
Ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
  
 0.989
Ndufs1
NADH:ubiquinone oxidoreductase core subunit S1.
  
 0.988
Ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
  
 0.988
Ndufb8
NADH:ubiquinone oxidoreductase subunit B8.
   
 0.985
Ndufb9
NADH:ubiquinone oxidoreductase subunit B9.
   
 0.985
Ndufb10
NADH:ubiquinone oxidoreductase subunit B10.
   
 0.984
Ndufa12
NADH:ubiquinone oxidoreductase subunit A12.
   
 0.984
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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