STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chmp5Charged multivesicular body protein 5. (219 aa)    
Predicted Functional Partners:
Vta1
Vesicle (multivesicular body) trafficking 1.
   
 0.999
Chmp2a
Charged multivesicular body protein 2A.
   
 0.993
Chmp3
Charged multivesicular body protein 3.
   
 0.993
Chmp4c
Charged multivesicular body protein 4C.
   
 0.986
ENSMSIP00000037347
annotation not available
   
 0.986
Chmp4b
Charged multivesicular body protein 4B.
   
0.981
ENSMSIP00000016921
annotation not available
   
 0.975
ENSMSIP00000029697
annotation not available
   
 0.975
2610002M06Rik
RIKEN cDNA 2610002M06 gene.
   
 0.971
Vps4a
Vacuolar protein sorting 4A.
   
 0.969
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.