Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Prim1DNA primase, p49 subunit. (418 aa)    
Predicted Functional Partners:
Prim2
DNA primase, p58 subunit.
  
 0.999
Pola2
Polymerase (DNA directed), alpha 2.
   
 0.999
Pola1
Polymerase (DNA directed), alpha 1.
   
 0.998
Mcm7
Minichromosome maintenance complex component 7.
   
 0.995
Mcm5
Minichromosome maintenance complex component 5.
   
 0.995
Mcm6
Minichromosome maintenance complex component 6.
   
 0.992
Pole
Polymerase (DNA directed), epsilon.
   
 0.991
Mcm2
Minichromosome maintenance complex component 2.
   
 0.990
Mcm3
Minichromosome maintenance complex component 3.
   
 0.990
ENSMSIP00000013405
annotation not available
   
 0.984
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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