STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ryr3Ryanodine receptor 3. (4882 aa)    
Predicted Functional Partners:
Ryr2
Ryanodine receptor 2, cardiac.
  
 
0.998
Ryr1
Ryanodine receptor 1, skeletal muscle.
  
 
0.993
Calm4
Calmodulin 4.
    
 0.988
Calml3
Calmodulin-like 3.
    
 0.988
ENSMSIP00000025951
annotation not available
    
 0.973
Jph1
Junctophilin 1.
   
 0.969
ENSMSIP00000019587
annotation not available
    
 0.967
Trdn
Triadin.
   
 0.967
Jph3
Junctophilin 3.
   
 0.966
Casq2
Calsequestrin 2.
   
 0.963
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.