Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Trem1Triggering receptor expressed on myeloid cells 1. (230 aa)    
Predicted Functional Partners:
ENSMSIP00000005339
annotation not available
   
 0.972
Trem2
Triggering receptor expressed on myeloid cells 2.
     
 0.894
Treml2
Triggering receptor expressed on myeloid cells-like 2.
     
 0.845
Treml1
Triggering receptor expressed on myeloid cells-like 1.
     
 0.695
Aqp9
Aquaporin 9.
   
  
 0.668
Tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
   
  
 0.661
Cd300lf
CD300 molecule like family member F.
   
 
 0.649
Cd300lg
CD300 molecule like family member G.
  
  
 0.638
Cd300a
CD300A molecule.
   
 
 0.600
Cd4
CD4 antigen.
      
 0.593
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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