Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000007971annotation not available (186 aa)    
Predicted Functional Partners:
Kpnb1
Karyopherin (importin) beta 1.
   
 0.966
Cse1l
Chromosome segregation 1-like (S. cerevisiae).
   
 0.952
ENSMSIP00000034770
annotation not available
 
  
  0.933
Nup153
Nucleoporin 153.
    
 
 0.884
Ncbp1
Nuclear cap binding protein subunit 1.
   
 
 0.872
Kpna3
Karyopherin (importin) alpha 3.
    
 0.871
ENSMSIP00000001306
annotation not available
    
 0.852
Kpna6
Karyopherin (importin) alpha 6.
    
 0.843
Kpna4
Karyopherin (importin) alpha 4.
    
 0.828
Rcc1
Regulator of chromosome condensation 1.
   
 
 0.813
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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