STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smu1Smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans). (513 aa)    
Predicted Functional Partners:
Ik
IK cytokine.
   
 0.997
ENSMSIP00000010676
annotation not available
   
 0.993
Sf3b3
Splicing factor 3b, subunit 3.
   
 0.993
Prpf38a
PRP38 pre-mRNA processing factor 38 (yeast) domain containing A.
   
 0.992
Zmat2
Zinc finger, matrin type 2.
    
 0.992
Prpf6
pre-mRNA splicing factor 6.
    
 0.991
ENSMSIP00000006658
annotation not available
   
 0.990
Prpf8
pre-mRNA processing factor 8.
    
 0.990
Sf3b1
Splicing factor 3b, subunit 1.
   
 0.989
Snrnp200
Small nuclear ribonucleoprotein 200 (U5).
   
 0.989
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.