STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Loxl1Lysyl oxidase-like 1. (607 aa)    
Predicted Functional Partners:
Mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.836
Eln
Elastin.
    
 0.682
Arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.666
Arid4b
AT rich interactive domain 4B (RBP1-like).
    
 0.666
Wdr90
WD repeat domain 90.
    
 0.658
Fbln5
Fibulin 5.
   
 
 0.628
Nynrin
NYN domain and retroviral integrase containing.
    
 0.613
Fbn1
Fibrillin 1.
   
  
 0.603
Glyr1
Glyoxylate reductase 1 homolog (Arabidopsis).
    
  0.601
Slf1
SMC5-SMC6 complex localization factor 1.
   
 0.591
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.