Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000008071annotation not available (210 aa)    
Predicted Functional Partners:
Hcfc1
Host cell factor C1.
   
 0.984
Bap1
Brca1 associated protein 1.
    
 0.973
Hcfc2
Host cell factor C2.
   
 0.968
Kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.953
ENSMSIP00000003002
annotation not available
    
 0.952
Asxl2
Additional sex combs like 2, transcriptional regulator.
    
 0.950
Tet2
Tet methylcytosine dioxygenase 2.
   
 
 0.944
Kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.942
Phf20
PHD finger protein 20.
    
 0.939
Oga
O-GlcNAcase.
   
 
 0.936
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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