Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ppp2r1bProtein phosphatase 2, regulatory subunit A, beta. (750 aa)    
Predicted Functional Partners:
Ppp2r5c
Protein phosphatase 2, regulatory subunit B', gamma.
   
 0.992
Ppp2r5b
Protein phosphatase 2, regulatory subunit B', beta.
   
 0.992
Ppp2r5e
Protein phosphatase 2, regulatory subunit B', epsilon.
   
 0.991
Ppp2r5a
Protein phosphatase 2, regulatory subunit B', alpha.
   
 0.991
Ppp2r5d
Protein phosphatase 2, regulatory subunit B', delta.
   
 0.990
Ppp2r2b
Protein phosphatase 2, regulatory subunit B, beta.
    
 0.988
Ppp2ca
Protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform.
   
 0.987
Ppp2r2d
Protein phosphatase 2, regulatory subunit B, delta.
    
 0.987
Ppp2r2c
Protein phosphatase 2, regulatory subunit B, gamma.
    
 0.986
Ppp2r2a
Protein phosphatase 2, regulatory subunit B, alpha.
   
 0.984
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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