Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CrtapCartilage associated protein. (400 aa)    
Predicted Functional Partners:
ENSMSIP00000012818
annotation not available
   
 0.985
Ppib
Peptidylprolyl isomerase B.
   
 0.974
P3h3
Prolyl 3-hydroxylase 3.
   
 0.930
Ppic
Peptidylprolyl isomerase C.
   
 0.922
P3h2
Prolyl 3-hydroxylase 2.
   
 0.908
Col5a2
Collagen, type V, alpha 2.
    
 0.814
Col3a1
Collagen, type III, alpha 1.
    
 0.790
Col1a2
Collagen, type I, alpha 2.
    
 0.769
Serpinh1
Serine (or cysteine) peptidase inhibitor, clade H, member 1.
   
 
 0.768
Col8a2
Collagen, type VIII, alpha 2.
    
 0.710
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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