Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000008335annotation not available (381 aa)    
Predicted Functional Partners:
Fastkd2
FAST kinase domains 2.
   
 0.864
Suclg1
succinate-CoA ligase, GDP-forming, alpha subunit.
    
   0.719
ENSMSIP00000022717
annotation not available
     
  0.647
Gosr1
Golgi SNAP receptor complex member 1.
     
  0.647
Stx5a
Syntaxin 5A.
     
  0.647
Trub2
TruB pseudouridine (psi) synthase family member 2.
    
 0.642
Gabpa
GA repeat binding protein, alpha.
     
 0.584
ENSMSIP00000007203
annotation not available
     
  0.568
ENSMSIP00000017577
annotation not available
     
  0.568
ENSMSIP00000031501
annotation not available
     
  0.568
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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