STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cyp3a13Cytochrome P450, family 3, subfamily a, polypeptide 13. (503 aa)    
Predicted Functional Partners:
Cyp1a2
Cytochrome P450, family 1, subfamily a, polypeptide 2.
  
0.959
Cyp1a1
Cytochrome P450, family 1, subfamily a, polypeptide 1.
  
0.957
Cyp2c70
Cytochrome P450, family 2, subfamily c, polypeptide 70.
  
0.954
Med17
Mediator complex subunit 17.
    
 0.954
Ugt1a1
UDP glucuronosyltransferase 1 family, polypeptide A1.
   
 0.954
Med14
Mediator complex subunit 14.
    
 0.953
Med29
Mediator complex subunit 29.
    
 0.951
Med15
Mediator complex subunit 15.
    
 0.951
Med6
Mediator complex subunit 6.
    
 0.951
Med7
Mediator complex subunit 7.
    
 0.951
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.