Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cyp3a13Cytochrome P450, family 3, subfamily a, polypeptide 13. (503 aa)    
Predicted Functional Partners:
Med14
Mediator complex subunit 14.
    
 0.915
Med4
Mediator complex subunit 4.
    
 0.913
Med17
Mediator complex subunit 17.
    
 0.906
Med6
Mediator complex subunit 6.
    
 0.906
Med10
Mediator complex subunit 10.
    
 0.898
Med20
Mediator complex subunit 20.
    
 0.897
Cyp1a2
Cytochrome P450, family 1, subfamily a, polypeptide 2.
  
0.895
Med24
Mediator complex subunit 24.
    
 0.895
Cyp1a1
Cytochrome P450, family 1, subfamily a, polypeptide 1.
  
0.894
Med7
Mediator complex subunit 7.
    
 0.891
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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