STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000008391annotation not available (647 aa)    
Predicted Functional Partners:
Ddx59
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59.
    
 
 0.538
Samd4b
Sterile alpha motif domain containing 4B.
      
 0.535
Tmem117
Transmembrane protein 117.
      
 0.535
Rimklb
Ribosomal modification protein rimK-like family member B.
      
 0.527
Dpy19l4
Dpy-19-like 4 (C. elegans).
      
 0.524
Ankrd33b
Ankyrin repeat domain 33B.
      
 0.522
Dmac1
Distal membrane arm assembly complex 1.
      
 0.520
Ttc37
Tetratricopeptide repeat domain 37.
      
 0.507
ENSMSIP00000006164
annotation not available
      
 0.491
Dcakd
dephospho-CoA kinase domain containing.
      
 0.491
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.