Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000008440annotation not available (72 aa)    
Predicted Functional Partners:
ENSMSIP00000006658
annotation not available
   
 0.997
ENSMSIP00000001919
annotation not available
   
 0.989
Snrpd1
Small nuclear ribonucleoprotein D1.
   
 0.989
ENSMSIP00000007222
annotation not available
   
 0.983
ENSMSIP00000014146
annotation not available
   
 0.983
ENSMSIP00000029631
annotation not available
   
 0.983
Snrnp70
Small nuclear ribonucleoprotein 70 (U1).
   
 0.981
ENSMSIP00000011200
annotation not available
   
 0.979
ENSMSIP00000018098
annotation not available
   
 0.979
Sf3b5
Splicing factor 3b, subunit 5.
   
 0.979
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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