Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Myh8Myosin, heavy polypeptide 8, skeletal muscle, perinatal. (1937 aa)    
Predicted Functional Partners:
ENSMSIP00000030277
annotation not available
   
 0.982
ENSMSIP00000032204
annotation not available
   
 0.976
ENSMSIP00000004109
annotation not available
   
 0.963
ENSMSIP00000012825
annotation not available
   
 0.963
Myh11
Myosin, heavy polypeptide 11, smooth muscle.
  
 
0.954
Myl2
Myosin, light polypeptide 2, regulatory, cardiac, slow.
   
 0.947
Mybpc3
Myosin binding protein C, cardiac.
   
 0.924
Tnnc2
Troponin C2, fast.
   
 0.909
Myl6b
Myosin, light polypeptide 6B.
   
 0.883
Myh3
Myosin, heavy polypeptide 3, skeletal muscle, embryonic.
  
 
0.882
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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