STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ceacam16Carcinoembryonic antigen-related cell adhesion molecule 16. (426 aa)    
Predicted Functional Partners:
Nfkb2
Nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100.
   
 0.984
Nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105.
   
 0.952
Tspear
Thrombospondin type laminin G domain and EAR repeats.
    
 0.798
Relb
Avian reticuloendotheliosis viral (v-rel) oncogene related B.
   
 0.784
Tecta
Tectorin alpha.
    
 0.784
Loxhd1
Lipoxygenase homology domains 1.
    
 
 0.782
Cyld
CYLD lysine 63 deubiquitinase.
    
 0.780
Tectb
Tectorin beta.
     
 0.779
Rel
Reticuloendotheliosis oncogene.
   
 0.735
ENSMSIP00000001306
annotation not available
   
 0.726
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.