STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc93Coiled-coil domain containing 93. (629 aa)    
Predicted Functional Partners:
ENSMSIP00000008449
annotation not available
    
 
 0.999
Vps26c
VPS26 endosomal protein sorting factor C.
    
 
 0.966
ENSMSIP00000038225
annotation not available
   
 
 0.964
Commd8
COMM domain containing 8.
    
 
 0.937
Commd5
COMM domain containing 5.
    
 
 0.936
ENSMSIP00000010003
annotation not available
    
 
 0.935
Vps29
VPS29 retromer complex component.
    
 
 0.935
Commd10
COMM domain containing 10.
    
 
 0.932
Commd9
COMM domain containing 9.
    
 
 0.932
ENSMSIP00000015477
annotation not available
   
 
 0.925
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.