STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec23ipSec23 interacting protein. (998 aa)    
Predicted Functional Partners:
Sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.971
Sec31a
Sec31 homolog A (S. cerevisiae).
    
 0.963
Sec23a
SEC23 homolog A, COPII coat complex component.
   
 0.939
Sec24a
Sec24 related gene family, member A (S. cerevisiae).
   
 
 0.829
Scfd1
Sec1 family domain containing 1.
   
 
 0.805
Sec22b
SEC22 homolog B, vesicle trafficking protein.
     
 0.786
Sec31b
Sec31 homolog B (S. cerevisiae).
    
 0.781
Sec24d
Sec24 related gene family, member D (S. cerevisiae).
   
 
 0.767
ENSMSIP00000000528
annotation not available
   
 0.756
Sec23b
SEC23 homolog B, COPII coat complex component.
   
 0.756
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.