STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrehTrehalase (brush-border membrane glycoprotein). (576 aa)    
Predicted Functional Partners:
Yipf6
Yip1 domain family, member 6.
  
 0.992
ENSMSIP00000008547
annotation not available
   
 
  0.940
Gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
  0.940
Cat
Catalase.
   
  
 0.939
Gbe1
Glucan (1,4-alpha-), branching enzyme 1.
  
 
 0.934
Pgghg
Protein glucosylgalactosylhydroxylysine glucosidase.
  
 0.908
Hk3
Hexokinase 3.
   
 
 0.763
Gck
Glucokinase.
   
 
 0.763
Hk2
Hexokinase 2.
   
 
 0.763
Hkdc1
Hexokinase domain containing 1.
   
 
 0.763
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.