STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rapgef6Rap guanine nucleotide exchange factor (GEF) 6. (1618 aa)    
Predicted Functional Partners:
Rap1b
RAS related protein 1b.
    
 0.975
Rap1a
RAS-related protein 1a.
    
 0.972
ENSMSIP00000016375
annotation not available
    
 0.972
Magi1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
    
 0.954
Magi2
Membrane associated guanylate kinase, WW and PDZ domain containing 2.
    
 0.921
Magi3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.909
F11r
F11 receptor.
     
 0.889
Rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
  
  
 
0.878
Ptpn13
Protein tyrosine phosphatase, non-receptor type 13.
    
 
 0.875
Mras
Muscle and microspikes RAS.
    
 0.755
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.