Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Vmn1r50Vomeronasal 1 receptor 50. (310 aa)    
Predicted Functional Partners:
Vmn2r120
Vomeronasal 2, receptor 120.
  
   
 0.706
Rho
Rhodopsin.
      
 0.671
Egr1
Early growth response 1.
      
 0.618
Fpr-rs6
Formyl peptide receptor, related sequence 6.
      
 0.618
Vmn2r95
Vomeronasal 2, receptor 95.
  
   
 0.545
Vmn2r3
Vomeronasal 2, receptor 3.
  
   
 0.503
Vmn2r84
Vomeronasal 2, receptor 84.
  
   
 0.451
Vmn2r69
Vomeronasal 2, receptor 69.
  
   
 0.434
Xndc1
Xrcc1 N-terminal domain containing 1.
      
 0.422
Vmn2r104
Vomeronasal 2, receptor 104.
  
   
 0.419
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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