Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000008822annotation not available (630 aa)    
Predicted Functional Partners:
Smurf1
SMAD specific E3 ubiquitin protein ligase 1.
    
 
 0.964
Smurf2
SMAD specific E3 ubiquitin protein ligase 2.
    
 
 0.865
ENSMSIP00000003401
annotation not available
    
   0.805
ENSMSIP00000010503
annotation not available
    
   0.805
Ccnb2
Cyclin B2.
    
   0.805
Capzb
Capping protein (actin filament) muscle Z-line, beta.
    
   0.795
Capza2
Capping protein (actin filament) muscle Z-line, alpha 2.
    
   0.664
Capza3
Capping protein (actin filament) muscle Z-line, alpha 3.
    
   0.664
Wdr41
WD repeat domain 41.
    
   0.663
Ccnb3
Cyclin B3.
    
   0.663
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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