STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
1810046K07RikRIKEN cDNA 1810046K07 gene. (235 aa)    
Predicted Functional Partners:
Colca2
COLCA2 homolog.
  
   
 0.677
1110032A03Rik
RIKEN cDNA 1110032A03 gene.
      
 0.592
ENSMSIP00000008105
annotation not available
      
 0.449
Pstpip2
Proline-serine-threonine phosphatase-interacting protein 2.
      
 0.449
Slc7a7
Solute carrier family 7 (cationic amino acid transporter, y+ system), member 7.
      
 0.422
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.